- Kozakiewicz CP, Burridge CP, Lee JS, Kraberger SJ, Fountain-Jones NM, Fisher RN, Lyren LM, Jennings MK, Riley SPD, Serieys LEK, Craft ME, Funk WC, Crooks KR, VandeWoude S, and Carver S (accepted). Habitat connectivity and host relatedness influence virus spread across an urbanising landscape in a fragmentation-sensitive carnivore. Virus Evolution.
- Moskaluk A, Darlington L, Kuhn S, Behzadi E, Gagne RB, Kozakiewicz CP, and VandeWoude S (2022). Genetic characterization of Microsporum canis clinical isolates in the United States. Journal of Fungi 8: 676.
- Beer MA, Kane R, Micheletti S, Kozakiewicz CP, and Storfer A (2022). Landscape genomics of the streamside salamander: Implications for species management in the face of climate change. Evolutionary Applications 15: 220–236.
- Kozakiewicz CP, Fraik AK, Patton AH, Ruiz-Aravena M, Hamilton DG, Hamede R, McCallum H, Hohenlohe PA, Margres MJ, Jones M, and Storfer A (2021). Spatial variation in gene expression of Tasmanian devil facial tumors despite minimal host transcriptomic response to infection. BMC Genomics 22: 698.
- Kozakiewicz CP and Funk WC (2021). Bat signal (of selection) summons evolutionary hope in face of epidemic disease: an example of the power and promise of genetic monitoring. Molecular Ecology 30: 5624–5627.
- Fountain-Jones NM, Kozakiewicz CP, Forester BR, Landguth EL, Carver S, Charleston M, Gagne RB, Greenwell B, Trumbo DR, Mayer M, Clark NJ, and Machado G (2021). MrIML: Multi-response interpretable machine learning to model genomic landscapes. Molecular Ecology Resources 21: 2766–2781.
- Patton AH, Lawrance M, Margres MJ, Kozakiewicz CP, Hamede R, Ruiz-Aravena M, Hamilton D, Comte S, Ricci L, Taylor R, Stadler T, Leaché A, McCallum H, Jones M, Hohenlohe P, and Storfer A (2020). A transmissible cancer shifts from emergence to endemism in Tasmanian devils. Science 370: eabb9772.
- Kozakiewicz CP†, Ricci L†, Patton AH, Stahlke AR, Hendricks SA, Margres MJ, Ruiz-Aravena M, Hamilton DG, Hamede R, McCallum H, Jones ME, Hohenlohe PA, and Storfer A (2020). Comparative landscape genetics reveals differential effects of environment on host and pathogen genetic structure in Tasmanian devils (Sarcophilus harrisii) and their transmissible tumour. Molecular Ecology 29: 3217–3233. † contributed equally
- Storfer A, Kozakiewicz CP, Beer MA, and Savage AE (2020). Applications of population genomics for understanding and mitigating wildlife disease. In: Population Genomics: Wildlife, Editors: Hohenlohe, P., and Rajora, O.P. Springer Nature, Switzerland.
- Kozakiewicz CP, Burridge CP, Lee JS, Kraberger SJ, Fountain-Jones NM, Funk WC, Boydston EE, Lyren LM, Jennings MK, Riley SPD, Serieys LEK, Crooks KR, VandeWoude S, and Carver S (2020). Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development. Evolutionary Applications 13: 1806–1817.
- Kozakiewicz CP, Burridge CP, Funk WC, Salerno PE, Trumbo DR, Gagne RB, Boydston EE, Fisher RN, Lyren LM, Jennings MK, Riley SPD, Serieys LEK, VandeWoude S, Crooks KR, and Carver S (2019). Urbanization reduces connectivity in bobcats (Lynx rufus) at both intra- and interpopulation scales. Molecular Ecology 28: 5068–5085.
- Trumbo DR, Salerno P, Logan K, Alldredge M, Gagne RB, Kozakiewicz CP, Kraberger S, Fountain-Jones N, Craft M, Carver S, Ernest H, Crooks K, VandeWoude S, and Funk WC (2019). Urbanization impacts apex predator gene flow but not genetic diversity across an urban-rural divide. Molecular Ecology 28: 4926–4940.
- Fraik AK, Quackenbush C, Margres MJ, Comte S, Hamilton DG, Kozakiewicz CP, Jones M, Hamede R, Hohenlohe PA, Storfer A, and Kelley JL (2019). Transcriptomics of Tasmanian devil (Sarcophilus harrisii) ear tissue reveals homogeneous gene expression patterns across a heterogeneous landscape. Genes 10: 801.
- Fitak RR, Antonides J, Baitchman E, Braun J, Chiu E, Dusek R, Fagre A, Forgacs D, Fountain-Jones N, Funk WC, Gagne E, Ghersi BM, Gilbertson M, Grimaldi W, Heisel S, Jardine C, Kamath P, Karmacharya D, Kozakiewicz CP, …, and Pecon-Slattery J (2019). The expectations and challenges of wildlife disease research in the era of genomics: forecasting with a horizon scan-like exercise. Journal of Heredity 110: 261–274.
- Kozakiewicz CP, Burridge CP, Funk WC, VandeWoude S, Crooks K, Ernest HB, Craft ME, Fountain-Jones NM and Carver S (2018). Pathogens in space: advancing understanding of pathogen dynamics and disease ecology through landscape genetics. Evolutionary Applications 11: 1763–1778.
- Kozakiewicz CP, Carver S, and Burridge CP (2018). Under-representation of avian studies in landscape genetics. Ibis 160: 1–12.
- Fountain-Jones NM, Craft ME, Funk WC, Kozakiewicz C, Trumbo D, Boydston EE, Lyren LM, Crooks K, Lee JS, VandeWoude S, and Carver S (2017). Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore. Molecular Ecology 26: 6487–6498.
- Kozakiewicz CP, Carver S, Austin JJ, Shephard JM, and Burridge CP (2017). Intrinsic factors drive spatial genetic variation in a highly vagile species, the wedge-tailed eagle Aquila audax, in Tasmania. Journal of Avian Biology 48: 1025–1034.